Software Packages, Tools, and Scripts
SEEDS: Stochastic Ecological and Evolutionary Dynamics System
SEEDS is an open-source computational platform for studying the ecological- and evolutionary dynamics of digital populations and communities. SEEDS is a plugin-based system that is designed to be easily used and extended. More information, source code, examples, and documentation are available at the SEEDS development site.
PlateTools is an open-source Python package for reading, manipulating, and analyzing microplate data. More information, source code, scripts, and documentation are available at the PlateTools development site.
Plotting Themes and Scripts
ggplot2 themes, scripts, etc.
Guides, HOWTOs, Tips, and Tricks
- Working with CSVs on the Command Line – Guide to using and manipulating CSV files on the command line